STRINGSTRING
HY2 protein (Physcomitrella patens) - STRING interaction network
"HY2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY2Predicted protein (405 aa)    
Predicted Functional Partners:
HO1b
Predicted protein (308 aa)
   
 
  0.955
HO1a
Predicted protein (310 aa)
   
 
  0.955
PP1S87_90V6.1
Predicted protein (852 aa)
       
 
  0.675
PP1S86_214V6.1
Predicted protein (934 aa)
       
 
  0.675
PP1S11_285V6.1
Predicted protein (843 aa)
       
 
  0.675
PP1S4_321V6.1
Predicted protein (210 aa)
   
     
  0.670
PP1S1_788V6.1
Predicted protein (217 aa)
   
     
  0.670
PP1S107_188V6.1
Predicted protein (217 aa)
   
     
  0.669
PP1S77_69V6.1
Predicted protein (210 aa)
   
     
  0.668
PP1S340_26V6.1
Predicted protein (258 aa)
   
     
  0.616
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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