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STRINGSTRING
PP1S60_191V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S60_191V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S60_191V6.1Predicted protein (298 aa)    
Predicted Functional Partners:
PP1S106_74V6.1
annotation not available (251 aa)
     
   
  0.989
ppabcf8
ATP-binding cassette transporter, subfamily F, member 8 protein PpABCF8 (768 aa)
   
      0.896
PP1S353_7V6.1
annotation not available (263 aa)
   
      0.896
ppabcf7
ATP-binding cassette transporter, subfamily F, member 7 protein PpABCF7 (773 aa)
   
      0.896
PP1S370_60V6.1
Predicted protein (231 aa)
   
 
  0.895
PP1S227_18V6.1
Predicted protein (172 aa)
     
        0.885
PP1S198_140V6.2
Predicted protein (216 aa)
     
        0.885
PP1S167_142V6.1
Predicted protein (480 aa)
     
        0.885
PP1S14_16V6.1
Predicted protein (264 aa)
     
        0.880
PP1S181_106V6.2
Predicted protein (712 aa)
     
        0.864
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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