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STRINGSTRING
PP1S6141_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S6141_1V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S6141_1V6.1Predicted protein (431 aa)    
Predicted Functional Partners:
PP1S8506_1V6.1
Predicted protein (343 aa)
 
     
  0.702
PP1S3980_1V6.1
Predicted protein (214 aa)
         
  0.663
PP1S92_8V6.1
Predicted protein (334 aa)
         
  0.624
PP1S290_35V6.2
Predicted protein (651 aa)
         
  0.624
PP1S9_79V6.1
annotation not available (187 aa)
         
  0.621
PP1S227_60V6.1
Predicted protein; Belongs to the PTH family (270 aa)
         
  0.611
PP1S142_89V6.1
Predicted protein; Belongs to the PTH family (290 aa)
         
  0.611
PP1S36_358V6.1
Predicted protein (757 aa)
           
  0.605
PP1S93_18V6.1
Predicted protein (343 aa)
   
   
  0.595
PP1S8174_1V6.1
Predicted protein (379 aa)
 
     
  0.569
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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