STRINGSTRING
PP1S61_125V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S61_125V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S61_125V6.1Predicted protein (220 aa)    
Predicted Functional Partners:
PP1S25_361V6.1
Predicted protein (476 aa)
   
 
  0.979
PP1S142_119V6.1
Annotation not available (445 aa)
   
 
  0.979
NDPK4
NDPK4 nucleotide diphosphate kinase-like protein (175 aa)
   
  0.969
NDPK6
NDPK6 nucleotide diphosphate kinase-like protein (183 aa)
   
  0.969
NDPK2b
Nucleoside diphosphate kinase (219 aa)
   
  0.969
NDPK2a
Nucleoside diphosphate kinase (216 aa)
   
  0.969
NDPK3a
Nucleoside diphosphate kinase (233 aa)
   
  0.969
NDPK5
NDPK5 nucleotide diphosphate kinase-like protein (393 aa)
   
  0.969
NDPK1
Nucleoside diphosphate kinase (152 aa)
   
  0.969
PP1S83_234V6.1
Uridine kinase (530 aa)
   
  0.964
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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