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STRINGSTRING
PP1S61_190V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S61_190V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S61_190V6.1Predicted protein (155 aa)    
Predicted Functional Partners:
PP1S156_122V6.1
annotation not available (600 aa)
           
  0.750
PP1S54_262V6.1
Predicted protein (380 aa)
           
  0.661
PP1S260_29V6.1
Predicted protein; Belongs to the protein kinase superfamily (618 aa)
           
  0.602
PP1S239_44V6.1
annotation not available (439 aa)
           
  0.600
PP1S15_233V6.1
tRNA (guanine(26)-N(2))-dimethyltransferase (715 aa)
           
  0.597
PP1S392_44V6.1
Predicted protein (153 aa)
     
        0.545
PP1S81_102V6.1
Predicted protein (674 aa)
           
  0.523
PP1S79_115V6.1
Predicted protein (625 aa)
           
  0.523
BOR1
Putative boron transporter (684 aa)
           
  0.523
PP1S64_199V6.1
Predicted protein; Belongs to the FGGY kinase family (575 aa)
           
  0.519
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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