STRINGSTRING
PP1S61_296V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S61_296V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S61_296V6.1Predicted protein (706 aa)    
Predicted Functional Partners:
PP1S158_40V6.1
Predicted protein (2275 aa)
   
  0.990
PP1S13_171V6.1
Predicted protein (2276 aa)
   
  0.990
PP1S40_9V6.1
Malate synthase (559 aa)
     
  0.973
ALDH2A
Predicted protein (553 aa)
   
  0.967
ALDH2B
Predicted protein (535 aa)
   
  0.967
ALDH3D
Aldehyde dehydrogenase (485 aa)
   
  0.967
ALDH3A
Aldehyde dehydrogenase (492 aa)
   
  0.967
ALDH3E
Variable substrate (583 aa)
   
  0.967
ALDH3B
Aldehyde dehydrogenase (479 aa)
   
  0.967
ALDH7A
Antiquitin (511 aa)
   
  0.967
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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