STRINGSTRING
Arl2 protein (Physcomitrella patens) - STRING interaction network
Arl2-family small GTPase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arl2Arl2-family small GTPase (185 aa)    
Predicted Functional Partners:
PP1S281_64V6.1
Annotation not available (1302 aa)
     
  0.984
PP1S87_27V6.1
Intraflagellar transport protein IFT43 (280 aa)
       
 
  0.667
PP1S107_192V6.1
Predicted protein (351 aa)
       
 
  0.651
PP1S14_316V6.1
Annotation not available (533 aa)
       
      0.633
PP1S69_29V6.1
Predicted protein (490 aa)
     
 
    0.573
PP1S434_9V6.1
Predicted protein (387 aa)
     
 
    0.573
PP1S434_8V6.1
Predicted protein (387 aa)
     
 
    0.573
PP1S434_14V6.1
Predicted protein (374 aa)
     
 
    0.573
PP1S346_26V6.1
Predicted protein (402 aa)
     
 
    0.573
PP1S269_11V6.1
Predicted protein (386 aa)
     
 
    0.573
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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