• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S62_216V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S62_216V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S62_216V6.1annotation not available (309 aa)    
Predicted Functional Partners:
PP1S153_74V6.1
Predicted protein (133 aa)
     
      0.851
PP1S14_255V6.1
Predicted protein (857 aa)
       
      0.848
PP1S240_76V6.1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier (90 aa)
     
      0.847
PP1S5_400V6.1
Predicted protein (1030 aa)
           
  0.749
PP1S91_88V6.1
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (152 aa)
     
      0.731
PP1S91_87V6.1
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (152 aa)
     
      0.731
PP1S219_106V6.1
annotation not available (162 aa)
     
      0.731
PP1S84_119V6.1
Predicted protein (514 aa)
     
 
  0.695
PP1S21_268V6.1
Predicted protein (332 aa)
     
   
  0.619
PP1S139_77V6.1
tRNA(His) guanylyltransferase; Adds a GMP to the 5’-end of tRNA(His) after transcription and RNase P cleavage (258 aa)
           
  0.619
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (13%) [HD]