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STRINGSTRING
PP1S62_220V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S62_220V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S62_220V6.1annotation not available (2054 aa)    
Predicted Functional Partners:
PP1S42_128V6.2
annotation not available (3896 aa)
     
        0.870
PP1S138_130V6.1
annotation not available (3911 aa)
     
        0.870
PP1S112_45V6.1
Predicted protein (2638 aa)
     
   
  0.762
PP1S456_14V6.1
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting (809 aa)
     
 
  0.631
PP1S313_104V6.1
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting (795 aa)
     
 
  0.631
PP1S158_178V6.1
annotation not available (1731 aa)
     
   
  0.630
PP1S198_172V6.1
Predicted protein (964 aa)
     
   
  0.610
PP1S181_63V6.1
Predicted protein (969 aa)
     
   
  0.610
PP1S1362_2V6.1
Predicted protein (305 aa)
     
 
  0.605
PP1S61_202V6.1
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family (235 aa)
       
      0.605
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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