STRINGSTRING
PP1S62_226V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S62_226V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S62_226V6.1Annotation not available (516 aa)    
Predicted Functional Partners:
PP1S372_7V6.1
Predicted protein (428 aa)
         
  0.938
PP1S287_38V6.1
Predicted protein (428 aa)
         
  0.938
PP1S13_206V6.1
Predicted protein (324 aa)
         
  0.938
PP1S11432_1V6.1
Predicted protein (146 aa)
     
      0.807
PP1S196_45V6.1
Predicted protein (401 aa)
         
 
0.800
PP1S300_8V6.1
Predicted protein (152 aa)
       
      0.764
PP1S3133_1V6.1
Predicted protein (342 aa)
   
   
  0.550
PP1S212_67V6.1
Predicted protein; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (186 aa)
       
      0.543
PP1S249_66V6.1
Predicted protein (152 aa)
       
      0.510
PP1S274_69V6.1
Urease (837 aa)
           
  0.503
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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