STRINGSTRING
PP1S62_239V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S62_239V6.1" - annotation not available in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S62_239V6.1annotation not available (410 aa)    
Predicted Functional Partners:
GTF1502.1
TATA-box binding protein, component of TFIID and TFIIIB (211 aa)
     
 
  0.940
GTF1502.2
TATA-box binding protein, component of TFIID and TFIIIB (265 aa)
     
 
  0.940
PP1S29_333V6.1
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (106 aa)
       
 
  0.938
PP1S104_211V6.1
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (106 aa)
       
 
  0.938
PP1S34_263V6.1
Predicted protein (311 aa)
     
 
  0.932
PP1S147_86V6.1
Predicted protein (311 aa)
     
 
  0.932
PP1S197_12V6.1
Predicted protein (145 aa)
     
 
  0.932
PP1S54_240V6.1
Predicted protein (483 aa)
     
 
  0.929
PP1S1_420V6.1
Uncharacterized protein (541 aa)
     
 
  0.927
PP1S149_261V6.1
Predicted protein (276 aa)
     
 
  0.926
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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