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STRINGSTRING
PP1S63_62V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S63_62V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S63_62V6.1Predicted protein (225 aa)    
Predicted Functional Partners:
PP1S114_14V6.1
Predicted protein; Belongs to the cytochrome P450 family (502 aa)
   
 
  0.938
PP1S20_113V6.1
annotation not available (155 aa)
     
 
  0.938
PP1S123_7V6.1
Predicted protein; Belongs to the sterol desaturase family (333 aa)
   
 
  0.938
PP1S45_126V6.1
annotation not available (632 aa)
   
 
  0.908
PP1S33_211V6.1
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family (761 aa)
   
 
  0.908
PP1S79_84V6.1
Predicted protein (153 aa)
   
 
  0.870
PP1S79_83V6.1
Predicted protein (135 aa)
   
 
  0.870
PP1S300_38V6.1
Predicted protein (538 aa)
   
 
  0.870
PP1S74_36V6.1
Predicted protein; Belongs to the sterol desaturase family (314 aa)
   
 
  0.827
PP1S31_31V6.1
Predicted protein; Belongs to the sterol desaturase family (275 aa)
   
 
  0.827
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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