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STRINGSTRING
PP1S64_122V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S64_122V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S64_122V6.1annotation not available (772 aa)    
Predicted Functional Partners:
PP1S329_23V6.1
Predicted protein (806 aa)
           
  0.623
PP1S217_12V6.1
annotation not available (726 aa)
           
  0.619
PP1S54_148V6.1
Predicted protein (576 aa)
     
      0.585
PP1S17_322V6.1
Predicted protein (131 aa)
           
  0.531
PP1S7_156V6.1
Uncharacterized protein (424 aa)
           
  0.521
PP1S63_54V6.2
Predicted protein (423 aa)
           
  0.521
PP1S62_215V6.1
annotation not available (1149 aa)
     
   
  0.517
PP1S229_38V6.1
Predicted protein (927 aa)
           
  0.517
ppabcc15
ATP-binding cassette transporter, subfamily C, member 15, group MRP protein PpABCC15 (1327 aa)
           
  0.514
ppabcc14
annotation not available (1428 aa)
           
  0.514
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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