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STRINGSTRING
PP1S64_135V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S64_135V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S64_135V6.1annotation not available (374 aa)    
Predicted Functional Partners:
PP1S101_225V6.1
Predicted protein; Belongs to the FPP/GGPP synthase family (360 aa)
     
  0.860
PP1S28_399V6.1
Uncharacterized protein (320 aa)
       
    0.831
PP1S32_278V6.1
Predicted protein (482 aa)
     
  0.792
PP1S210_40V6.1
Predicted protein (475 aa)
     
  0.792
PP1S8_131V6.2
Predicted protein; Belongs to the FPP/GGPP synthase family (416 aa)
     
  0.720
PP1S55_266V6.1
Predicted protein; Belongs to the FPP/GGPP synthase family (347 aa)
     
  0.720
PP1S3_343V6.1
Predicted protein; Belongs to the FPP/GGPP synthase family (387 aa)
     
  0.720
PP1S167_155V6.1
Predicted protein; Belongs to the FPP/GGPP synthase family (387 aa)
     
  0.720
PP1S114_86V6.1
Predicted protein (741 aa)
   
   
  0.674
PP1S144_58V6.1
Predicted protein (381 aa)
         
  0.668
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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