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STRINGSTRING
PP1S64_14V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S64_14V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S64_14V6.1Predicted protein (515 aa)    
Predicted Functional Partners:
PP1S332_31V6.1
Predicted protein (875 aa)
     
 
  0.926
PP1S207_106V6.1
Predicted protein (874 aa)
     
 
  0.926
PP1S54_273V6.1
Predicted protein (963 aa)
     
 
  0.920
PP1S127_31V6.1
Predicted protein (963 aa)
     
 
  0.920
PP1S36_35V6.1
Predicted protein (493 aa)
     
 
  0.919
PP1S105_41V6.3
annotation not available (254 aa)
     
 
  0.875
PP1S244_53V6.1
Predicted protein (591 aa)
     
 
  0.871
PP1S210_63V6.1
Predicted protein (650 aa)
     
 
  0.871
PP1S41_19V6.1
Predicted protein (874 aa)
     
 
  0.827
PP1S14_125V6.1
Predicted protein (881 aa)
     
 
  0.827
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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