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DES6 protein (Physcomitrella patens) - STRING interaction network
"DES6" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DES6Predicted protein; Fatty acid desaturase able to introduce a delta(6)- double bond into delta(9)-unsaturated fatty-acid substrates. Can use both linoleic acid (18-2(9Z,12Z)) and alpha-linolenic acid (18-3(9Z,12Z,15Z)) as substrates. Required for the biosynthesis of arachidonic acid (20-4(5z,8Z,11Z,14Z)) (525 aa)    
Predicted Functional Partners:
PSE1
Predicted protein (290 aa)
           
  0.504
PP1S68_264V6.1
Predicted protein (397 aa)
     
   
  0.488
PP1S495_13V6.1
Predicted protein (401 aa)
     
   
  0.488
PHY2
Phytochrome 2; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1130 aa)
           
  0.479
PP1S52_4V6.1
Predicted protein (403 aa)
     
   
  0.423
PP1S30_149V6.1
Predicted protein (375 aa)
     
   
  0.423
PP1S21_262V6.1
Predicted protein (375 aa)
     
   
  0.423
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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