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STRINGSTRING
PP1S64_214V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S64_214V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S64_214V6.1annotation not available (540 aa)    
Predicted Functional Partners:
Mcb1
Multiubiquitin chain-binding protein (414 aa)
     
 
  0.925
PP1S89_19V6.1
Predicted protein; Belongs to the SNF7 family (235 aa)
     
 
  0.922
PP1S104_29V6.1
Predicted protein; Belongs to the SNF7 family (224 aa)
     
 
  0.922
PP1S21_268V6.1
Predicted protein (332 aa)
     
 
  0.907
PP1S229_18V6.1
Predicted protein (401 aa)
     
 
  0.894
PP1S3_23V6.1
Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family (227 aa)
     
 
  0.870
PP1S123_8V6.1
Predicted protein (430 aa)
     
 
  0.869
PP1S10_364V6.1
Predicted protein (117 aa)
     
 
  0.863
PP1S286_33V6.1
Predicted protein (322 aa)
     
 
  0.854
PP1S52_141V6.2
Predicted protein; Belongs to the SNF7 family (229 aa)
     
 
  0.844
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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