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STRINGSTRING
PP1S64_85V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S64_85V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S64_85V6.1Predicted protein; Belongs to the AAA ATPase family (563 aa)    
Predicted Functional Partners:
PP1S3_332V6.1
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (606 aa)
     
   
  0.859
PP1S60_307V6.1
Predicted protein (347 aa)
     
 
  0.717
PP1S1_402V6.1
annotation not available (744 aa)
     
 
  0.695
PP1S224_38V6.1
Predicted protein (991 aa)
   
 
  0.690
PP1S245_32V6.2
Predicted protein (322 aa)
     
 
  0.677
PP1S34_215V6.2
Predicted protein (467 aa)
     
 
  0.633
PP1S358_11V6.1
Predicted protein (409 aa)
     
 
  0.615
PP1S130_285V6.1
Predicted protein (241 aa)
     
 
  0.615
PP1S2_25V6.1
annotation not available (1092 aa)
     
   
  0.566
PP1S86_210V6.1
Predicted protein (919 aa)
     
   
  0.559
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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