STRINGSTRING
PP1S65_111V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S65_111V6.1" - DNA polymerase in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S65_111V6.1DNA polymerase (1236 aa)    
Predicted Functional Partners:
PP1S157_48V6.1
Predicted protein (443 aa)
     
  0.997
PP1S145_94V6.1
Predicted protein (644 aa)
     
  0.987
PP1S90_95V6.1
DNA primase (455 aa)
     
  0.984
PP1S298_31V6.1
Predicted protein (134 aa)
       
  0.983
PP1S225_68V6.1
Predicted protein (992 aa)
     
  0.983
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
   
  0.978
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
   
  0.978
PP1S127_26V6.1
Predicted protein; Participates in DNA repair and in chromosomal DNA replication (523 aa)
     
  0.971
PP1S257_37V6.1
DNA polymerase (1555 aa)
     
0.969
PP1S434_20V6.1
Predicted protein (437 aa)
     
  0.965
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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