• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S65_113V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S65_113V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S65_113V6.1Predicted protein (288 aa)    
Predicted Functional Partners:
PP1S202_1V6.1
Predicted protein (339 aa)
         
  0.967
PP1S281_105V6.1
Predicted protein (426 aa)
   
   
 
0.802
PP1S66_138V6.1
Predicted protein (415 aa)
 
   
  0.706
PP1S158_146V6.1
Predicted protein (347 aa)
         
  0.702
PP1S107_60V6.1
Predicted protein (269 aa)
         
  0.702
PP1S13_206V6.1
Predicted protein (324 aa)
           
  0.686
PP1S39_351V6.1
annotation not available (870 aa)
     
 
  0.672
PP1S2_272V6.1
Predicted protein (895 aa)
     
 
  0.672
SLY1PS
annotation not available (318 aa)
     
 
  0.641
SLY1A
SM/Sec1-family protein ; Belongs to the STXBP/unc-18/SEC1 family (625 aa)
     
 
  0.641
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (7%) [HD]