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cslA1 protein (Physcomitrella patens) - STRING interaction network
"cslA1" - Cellulose synthase-like A1, glycosyltransferase family 2 protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cslA1Cellulose synthase-like A1, glycosyltransferase family 2 protein; mannan synthase (538 aa)    
Predicted Functional Partners:
cslD6
Cellulose synthase-like D6, glycosyltransferase family 2 protein (1165 aa)
           
  0.899
PP1S48_37V6.2
Predicted protein (517 aa)
           
  0.610
PP1S248_13V6.1
Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls (536 aa)
           
  0.603
PP1S1_785V6.1
annotation not available (279 aa)
         
  0.542
PP1S107_189V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (811 aa)
         
  0.542
PP1S71_197V6.1
Formin-like protein; Belongs to the formin-like family (1081 aa)
     
 
  0.542
PP1S17_57V6.1
Formin-like protein; Belongs to the formin-like family (1127 aa)
     
 
  0.542
PP1S156_136V6.1
annotation not available (1101 aa)
     
 
  0.542
PP1S122_164V6.1
annotation not available (1369 aa)
     
 
  0.542
PP1S34_215V6.2
Predicted protein (467 aa)
           
  0.538
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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