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STRINGSTRING
PP1S65_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S65_1V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S65_1V6.1Predicted protein (208 aa)    
Predicted Functional Partners:
PP1S73_48V6.1
Predicted protein (998 aa)
     
 
  0.954
PP1S9_370V6.1
annotation not available (128 aa)
     
 
  0.952
PP1S138_181V6.1
ER membrane protein complex subunit 3 (274 aa)
     
 
  0.943
PP1S130_152V6.1
ER membrane protein complex subunit 3 (276 aa)
     
 
  0.943
PP1S47_175V6.1
Predicted protein (309 aa)
     
 
  0.940
PP1S110_134V6.1
Predicted protein (303 aa)
     
 
  0.939
PP1S168_27V6.1
Predicted protein (205 aa)
     
 
  0.936
PP1S3_192V6.1
Predicted protein (179 aa)
     
 
  0.929
PP1S7_46V6.1
Uncharacterized protein (117 aa)
     
        0.885
PP1S36_15V6.1
annotation not available (183 aa)
     
        0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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