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PP1S65_227V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S65_227V6.1" - Auxin response factor in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S65_227V6.1Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (937 aa)    
Predicted Functional Partners:
PP1S206_49V6.1
Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family (576 aa)
           
  0.687
PP1S17_180V6.1
Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family (564 aa)
           
  0.687
HB10
Class III homeodomain-leucine zipper (871 aa)
           
  0.681
CRE1
annotation not available (1040 aa)
           
  0.680
PpIAA1b
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (503 aa)
     
 
  0.652
PP1S99_260V6.1
Predicted protein (1158 aa)
       
 
  0.631
PP1S316_34V6.1
annotation not available (1158 aa)
       
 
  0.631
PP1S286_43V6.1
Predicted protein (592 aa)
           
  0.606
PP1S59_321V6.1
Uncharacterized protein (133 aa)
           
  0.545
PP1S338_47V6.1
Predicted protein (131 aa)
           
  0.545
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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