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STRINGSTRING
PP1S65_271V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S65_271V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S65_271V6.2Predicted protein (1010 aa)    
Predicted Functional Partners:
PP1S146_88V6.1
Predicted protein (930 aa)
   
 
0.986
PP1S376_31V6.1
Predicted protein (558 aa)
     
   
  0.941
PP1S141_33V6.1
annotation not available (290 aa)
     
   
  0.941
PP1S26_83V6.1
annotation not available (1151 aa)
   
   
  0.887
PP1S415_6V6.1
Predicted protein (284 aa)
   
 
  0.617
PP1S319_35V6.1
Predicted protein (284 aa)
   
 
  0.617
PP1S24_154V6.1
Predicted protein (278 aa)
   
 
  0.617
PP1S22_40V6.1
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family (757 aa)
   
   
  0.587
PP1S255_4V6.1
Predicted protein (860 aa)
     
   
  0.566
PP1S235_137V6.1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling (189 aa)
       
      0.563
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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