• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S65_300V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S65_300V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S65_300V6.1annotation not available (454 aa)    
Predicted Functional Partners:
PP1S13_274V6.1
Predicted protein (1663 aa)
           
  0.749
PP1S395_21V6.1
Predicted protein (189 aa)
           
  0.620
PP1S9_330V6.1
annotation not available (1056 aa)
           
  0.587
PP1S185_95V6.1
annotation not available (1200 aa)
           
  0.587
PP1S13_275V6.1
annotation not available (299 aa)
           
  0.575
PP1S87_19V6.5
annotation not available (374 aa)
           
  0.561
PP1S86_67V6.1
annotation not available (194 aa)
           
  0.561
PP1S11_381V6.1
Predicted protein (374 aa)
           
  0.561
PP1S90_118V6.1
Predicted protein (502 aa)
           
  0.531
PP1S533_4V6.1
annotation not available (366 aa)
           
  0.531
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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