STRINGSTRING
PP1S65_4V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S65_4V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S65_4V6.1Predicted protein (337 aa)    
Predicted Functional Partners:
PP1S3_646V6.1
Annotation not available (1055 aa)
     
 
  0.935
PP1S313_13V6.1
Annotation not available (622 aa)
     
  0.929
PP1S25_351V6.1
Annotation not available (451 aa)
     
  0.929
PP1S126_78V6.1
Annotation not available (657 aa)
     
  0.929
PP1S114_52V6.1
Annotation not available (302 aa)
     
  0.929
PP1S101_153V6.1
Predicted protein (373 aa)
     
  0.929
PP1S107_189V6.1
Predicted protein (811 aa)
         
  0.890
PP1S3133_1V6.1
Predicted protein (342 aa)
   
 
  0.860
PP1S240_31V6.1
Predicted protein (193 aa)
       
 
  0.835
PpDCL1a
DsRNA-specific nuclease dicer and related ribonuclease (1866 aa)
   
 
  0.812
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (13%) [HD]