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STRINGSTRING
PP1S66_27V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S66_27V6.1" - Peroxidase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S66_27V6.1Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (340 aa)    
Predicted Functional Partners:
PP1S98_45V6.1
Predicted protein (264 aa)
     
   
  0.690
PP1S30_96V6.1
Uncharacterized protein (209 aa)
           
  0.689
PP1S272_58V6.1
Predicted protein (302 aa)
           
  0.689
PP1S236_47V6.1
annotation not available (344 aa)
           
  0.689
PP1S1_158V6.1
Uncharacterized protein (339 aa)
           
  0.689
PP1S84_209V6.1
Predicted protein (356 aa)
         
    0.650
PP1S56_71V6.1
Predicted protein (378 aa)
         
    0.650
PP1S163_63V6.1
Predicted protein (362 aa)
         
    0.650
PP1S126_185V6.1
Predicted protein (347 aa)
         
    0.650
PP1S94_154V6.1
Predicted protein (321 aa)
           
  0.618
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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