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STRINGSTRING
PP1S670_3V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S670_3V6.1" - Acyl-coenzyme A oxidase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S670_3V6.1Acyl-coenzyme A oxidase ; Belongs to the acyl-CoA oxidase family (691 aa)    
Predicted Functional Partners:
PP1S60_178V6.1
Predicted protein (319 aa)
   
   
  0.951
PP1S54_102V6.1
Predicted protein (169 aa)
   
   
  0.951
PP1S15_268V6.1
Predicted protein (251 aa)
   
 
  0.922
PP1S283_76V6.1
Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family (726 aa)
   
  0.920
PP1S75_175V6.1
Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family (720 aa)
   
  0.893
PP1S165_33V6.1
Predicted protein (732 aa)
   
  0.893
PP1S67_59V6.1
Predicted protein; Belongs to the thiolase family (460 aa)
   
 
  0.881
PP1S55_275V6.1
Predicted protein; Belongs to the thiolase family (460 aa)
   
 
  0.881
PP1S200_18V6.3
Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family (375 aa)
   
  0.872
PP1S2_33V6.1
Predicted protein; Belongs to the thiolase family (437 aa)
   
 
  0.867
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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