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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S67_154V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S67_154V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S67_154V6.1Predicted protein (334 aa)    
Predicted Functional Partners:
PP1S110_18V6.3
Predicted protein (212 aa)
     
   
0.610
PP1S159_5V6.2
Predicted protein (209 aa)
     
   
0.609
PP1S185_43V6.1
annotation not available (1510 aa)
           
  0.595
PP1S167_49V6.1
annotation not available (1413 aa)
           
  0.595
PP1S7_125V6.1
Uncharacterized protein (139 aa)
           
  0.576
PP1S28_127V6.1
Uncharacterized protein (141 aa)
           
  0.576
PP1S8_70V6.1
Predicted protein (1420 aa)
           
  0.536
PP1S74_185V6.1
Predicted protein (1424 aa)
           
  0.536
PP1S356_35V6.1
Predicted protein (508 aa)
     
   
  0.535
PP1S131_4V6.1
Predicted protein (297 aa)
     
        0.531
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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