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STRINGSTRING
PP1S67_257V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S67_257V6.1" - Thymidine kinase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S67_257V6.1Thymidine kinase (367 aa)    
Predicted Functional Partners:
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
   
 
  0.999
PP1S2_34V6.1
Predicted protein; Cytidine deaminase (325 aa)
   
 
  0.989
PP1S223_42V6.1
Predicted protein (259 aa)
   
 
  0.980
PP1S426_43V6.1
Predicted protein (324 aa)
   
 
  0.972
PP1S4_450V6.1
Predicted protein (207 aa)
   
 
  0.970
PP1S49_109V6.1
Predicted protein (599 aa)
     
   
  0.937
PP1S114_124V6.1
Adenine phosphoribosyltransferase (286 aa)
   
   
  0.917
PP1S177_14V6.2
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (184 aa)
     
   
  0.905
PP1S503_12V6.1
Predicted protein (226 aa)
     
   
  0.896
PP1S355_49V6.1
DNA helicase; Belongs to the MCM family (727 aa)
     
   
  0.896
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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