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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S67_32V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S67_32V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S67_32V6.1annotation not available (1189 aa)    
Predicted Functional Partners:
PP1S72_227V6.1
Predicted protein (3779 aa)
     
   
  0.626
PP1S53_78V6.1
annotation not available (3804 aa)
     
   
  0.626
PP1S115_78V6.1
Predicted protein (760 aa)
     
   
  0.612
PP1S84_5V6.1
annotation not available (144 aa)
       
 
  0.600
PP1S147_153V6.1
Predicted protein (1168 aa)
       
 
  0.600
PP1S109_57V6.1
annotation not available (2641 aa)
     
        0.578
PP1S4_490V6.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (362 aa)
           
  0.575
PP1S58_188V6.1
Predicted protein; Belongs to the PI3/PI4-kinase family (891 aa)
     
   
  0.563
PP1S313_51V6.1
annotation not available (1252 aa)
     
   
  0.559
PP1S76_78V6.1
Predicted protein (574 aa)
     
   
  0.558
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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