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PP1S67_86V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S67_86V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S67_86V6.1Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family (701 aa)    
Predicted Functional Partners:
PP1S142_26V6.1
Predicted protein (491 aa)
     
   
  0.929
PP1S15_233V6.1
tRNA (guanine(26)-N(2))-dimethyltransferase (715 aa)
     
   
  0.925
PP1S12_309V6.1
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family (495 aa)
     
   
  0.925
PP1S307_72V6.2
Predicted protein (502 aa)
     
   
  0.916
PP1S185_119V6.1
Predicted protein (264 aa)
   
        0.905
PP1S130_196V6.1
Predicted protein (332 aa)
   
        0.903
PP1S2_451V6.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (280 aa)
   
        0.891
PP1S22_320V6.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (252 aa)
   
        0.891
PP1S5_92V6.1
annotation not available (1043 aa)
   
        0.890
PP1S93_182V6.1
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1046 aa)
     
        0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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