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STRINGSTRING
PP1S6823_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S6823_1V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S6823_1V6.1Predicted protein; Belongs to the FPP/GGPP synthase family (302 aa)    
Predicted Functional Partners:
PP1S98_5V6.1
Predicted protein (526 aa)
   
   
  0.682
PP1S323_70V6.1
Predicted protein (437 aa)
   
 
  0.657
PP1S23_185V6.1
Predicted protein (406 aa)
   
 
  0.657
PP1S198_126V6.1
Predicted protein (407 aa)
   
 
  0.657
PP1S196_120V6.2
Predicted protein (432 aa)
   
 
  0.657
PP1S160_27V6.1
Predicted protein (354 aa)
   
 
  0.657
PP1S134_62V6.2
Predicted protein (432 aa)
   
 
  0.657
PP1S14_106V6.1
annotation not available (681 aa)
     
 
  0.657
PP1S61_10V6.1
3-hydroxy-3-methylglutaryl coenzyme A reductase (582 aa)
   
 
  0.655
PP1S1_155V6.1
3-hydroxy-3-methylglutaryl coenzyme A reductase (578 aa)
   
 
  0.655
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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