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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S68_167V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S68_167V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S68_167V6.1Predicted protein (355 aa)    
Predicted Functional Partners:
HO2b
Uncharacterized protein (939 aa)
   
   
  0.906
PP1S58_81V6.1
annotation not available (943 aa)
   
   
  0.906
PP1S147_55V6.1
Predicted protein (939 aa)
   
   
  0.906
HO1b
Uncharacterized protein (308 aa)
     
   
  0.889
HO1a
Uncharacterized protein (310 aa)
     
   
  0.889
PP1S403_7V6.1
Predicted protein (1084 aa)
     
        0.885
PP1S242_51V6.1
annotation not available (408 aa)
     
        0.885
PP1S23_11V6.2
Glutathione S-transferase kappa (240 aa)
     
        0.885
PP1S212_40V6.1
Predicted protein (881 aa)
     
        0.885
PP1S104_76V6.1
Predicted protein (645 aa)
     
        0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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