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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S68_228V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S68_228V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S68_228V6.1annotation not available (216 aa)    
Predicted Functional Partners:
PP1S391_11V6.1
Vacuolar ATPase assembly integral membrane protein VMA21 homolog; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum (111 aa)
           
  0.887
PP1S74_120V6.1
Predicted protein (2186 aa)
       
      0.847
PP1S65_251V6.1
annotation not available (787 aa)
       
      0.844
PP1S48_56V6.1
Predicted protein (345 aa)
       
      0.844
PP1S54_7V6.1
Ctr family transporter (162 aa)
           
  0.689
PP1S130_87V6.1
Ctr family copper transporter (139 aa)
           
  0.689
PP1S342_2V6.1
annotation not available (358 aa)
       
      0.633
PP1S31_77V6.1
annotation not available (645 aa)
       
      0.633
PP1S228_73V6.1
Predicted protein (694 aa)
       
      0.633
PP1S17_221V6.1
Predicted protein (423 aa)
       
      0.633
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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