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STRINGSTRING
PP1S68_249V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S68_249V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S68_249V6.1Predicted protein (169 aa)    
Predicted Functional Partners:
PP1S31_214V6.2
Repressor of RNA polymerase III transcription (227 aa)
     
        0.885
PP1S207_52V6.3
Predicted protein (227 aa)
     
        0.885
PP1S38_282V6.1
annotation not available (976 aa)
     
 
  0.800
PP1S304_66V6.2
Predicted protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (998 aa)
     
 
  0.800
CpDnm
Putative uncharacterized protein PpCpDnm ; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (836 aa)
     
 
  0.800
PP1S39_313V6.1
annotation not available (418 aa)
       
 
  0.798
PP1S2_276V6.1
annotation not available (414 aa)
       
 
  0.798
PP1S22_260V6.1
Predicted protein (323 aa)
       
 
  0.798
PP1S22_259V6.1
Predicted protein (323 aa)
       
 
  0.798
PP1S200_26V6.1
annotation not available (405 aa)
       
 
  0.798
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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