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STRINGSTRING
PP1S68_36V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S68_36V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S68_36V6.1Predicted protein (516 aa)    
Predicted Functional Partners:
PP1S7_57V6.1
annotation not available (551 aa)
           
  0.543
PP1S14_106V6.1
annotation not available (681 aa)
     
   
  0.539
PP1S40_68V6.1
Predicted protein (331 aa)
           
  0.530
PP1S193_64V6.1
Predicted protein (541 aa)
     
   
  0.517
PP1S93_184V6.1
Predicted protein (409 aa)
     
   
  0.513
PP1S182_92V6.1
Predicted protein (569 aa)
     
   
  0.513
PP1S160_146V6.1
Predicted protein (649 aa)
     
   
  0.513
PP1S462_2V6.1
Predicted protein (263 aa)
           
  0.510
PP1S42_64V6.2
Predicted protein (475 aa)
           
  0.510
PP1S138_173V6.2
Predicted protein (468 aa)
           
  0.510
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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