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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S68_4V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S68_4V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S68_4V6.1annotation not available (117 aa)    
Predicted Functional Partners:
PP1S9_445V6.1
annotation not available (767 aa)
     
 
  0.925
PP1S61_42V6.1
Predicted protein (1457 aa)
     
 
  0.906
PP1S123_151V6.1
Predicted protein (500 aa)
       
      0.815
PP1S18_235V6.1
Predicted protein; Belongs to the MRE11/RAD32 family (716 aa)
   
 
  0.811
PP1S17_107V6.1
Predicted protein (433 aa)
     
 
  0.759
PP1S27_374V6.1
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (443 aa)
     
 
  0.752
PP1S475_11V6.1
Predicted protein (571 aa)
     
 
  0.736
PP1S3_426V6.1
Predicted protein (553 aa)
     
 
  0.736
PP1S72_198V6.1
annotation not available (1160 aa)
     
 
  0.734
PP1S265_31V6.1
annotation not available (2815 aa)
     
 
  0.716
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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