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STRINGSTRING
PP1S698_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S698_1V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S698_1V6.1annotation not available (105 aa)    
Predicted Functional Partners:
PP1S106_39V6.1
Predicted protein (86 aa)
       
 
  0.897
PP1S55_292V6.1
Predicted protein (915 aa)
           
  0.741
PP1S287_13V6.1
Predicted protein (851 aa)
           
  0.741
PP1S22_40V6.1
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family (757 aa)
     
 
  0.710
PP1S30_333V6.1
annotation not available (315 aa)
   
   
  0.690
PP1S102_71V6.2
Predicted protein (468 aa)
   
   
  0.690
PP1S54_7V6.1
Ctr family transporter (162 aa)
     
 
  0.676
PP1S130_87V6.1
Ctr family copper transporter (139 aa)
     
 
  0.676
PP1S136_168V6.1
annotation not available (663 aa)
   
 
  0.648
PP1S98_142V6.1
Predicted protein (386 aa)
         
  0.647
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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