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HCP1501 protein (Physcomitrella patens) - STRING interaction network
"HCP1501" - Sin3 complex component in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCP1501Sin3 complex component (158 aa)    
Predicted Functional Partners:
PP1S89_173V6.1
Predicted protein (721 aa)
       
  0.984
PP1S271_81V6.1
Predicted protein (697 aa)
       
  0.984
PP1S57_34V6.1
Predicted protein (656 aa)
       
      0.874
PP1S300_41V6.1
Predicted protein (670 aa)
       
      0.874
PP1S36_174V6.1
Annotation not available (453 aa)
       
  0.823
PP1S313_14V6.1
Annotation not available (447 aa)
       
  0.823
PP1S157_87V6.1
Annotation not available (346 aa)
       
    0.820
PP1S77_164V6.1
Annotation not available (277 aa)
     
 
    0.814
PP1S57_186V6.1
Predicted protein (284 aa)
     
 
    0.814
PP1S4_67V6.1
Annotation not available (298 aa)
     
 
    0.814
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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