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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S69_151V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S69_151V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S69_151V6.1annotation not available (426 aa)    
Predicted Functional Partners:
PP1S72_148V6.1
Predicted protein; Belongs to the arginase family (355 aa)
   
   
  0.688
PP1S4979_1V6.1
Arginase; Belongs to the arginase family (299 aa)
   
   
  0.688
PP1S8619_1V6.1
annotation not available (257 aa)
   
   
  0.674
PP1S73_185V6.1
Predicted protein (441 aa)
         
  0.651
PP1S61_277V6.2
Predicted protein (474 aa)
         
  0.651
PP1S175_129V6.1
Predicted protein (423 aa)
   
   
  0.643
PP1S118_165V6.1
Predicted protein; Belongs to the HisA/HisF family (324 aa)
           
  0.625
PP1S302_37V6.1
NADPH-adrenodoxin oxidoreductase, mitochondrial (529 aa)
         
  0.615
PP1S347_36V6.1
Predicted protein (297 aa)
         
  0.609
PP1S475_19V6.1
Predicted protein (446 aa)
           
  0.600
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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