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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S69_198V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S69_198V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S69_198V6.1annotation not available (177 aa)    
Predicted Functional Partners:
PP1S96_146V6.2
annotation not available (1326 aa)
           
  0.562
PP1S7_121V6.1
annotation not available (1284 aa)
           
  0.562
PP1S287_23V6.1
annotation not available (1164 aa)
           
  0.562
PP1S55_123V6.1
annotation not available (422 aa)
           
  0.514
PP1S6_294V6.1
annotation not available (1354 aa)
           
  0.499
PP1S39_424V6.1
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (318 aa)
           
  0.499
PP1S38_196V6.1
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (319 aa)
           
  0.499
PP1S1_623V6.1
annotation not available (123 aa)
           
  0.499
PP1S67_59V6.1
Predicted protein; Belongs to the thiolase family (460 aa)
           
  0.497
PP1S55_275V6.1
Predicted protein; Belongs to the thiolase family (460 aa)
           
  0.497
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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