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STRINGSTRING
PP1S69_223V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S69_223V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S69_223V6.1Predicted protein (445 aa)    
Predicted Functional Partners:
PP1S167_142V6.1
Predicted protein (480 aa)
   
   
  0.574
PP1S5_162V6.1
Predicted protein (372 aa)
     
   
  0.550
PP1S136_120V6.1
Predicted protein (494 aa)
     
   
  0.519
PP1S79_275V6.1
annotation not available (171 aa)
           
  0.518
PP1S20_19V6.1
annotation not available (493 aa)
           
  0.518
PP1S165_30V6.1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family (372 aa)
         
  0.513
PP1S56_233V6.1
3-oxoacyl-[acyl-carrier-protein] synthase ; Belongs to the beta-ketoacyl-ACP synthases family (475 aa)
     
   
  0.511
PP1S52_45V6.1
3-oxoacyl-[acyl-carrier-protein] synthase (471 aa)
     
   
  0.511
PP1S201_89V6.1
Predicted protein; Belongs to the beta-ketoacyl-ACP synthases family (470 aa)
     
   
  0.511
PP1S336_57V6.1
Predicted protein (693 aa)
           
  0.511
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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