• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S69_31V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S69_31V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S69_31V6.1Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (148 aa)    
Predicted Functional Partners:
PP1S116_90V6.1
annotation not available (1361 aa)
     
 
  0.937
PP1S46_78V6.1
Predicted protein (83 aa)
     
 
  0.922
PP1S224_38V6.1
Predicted protein (991 aa)
     
 
  0.921
PP1S60_129V6.1
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (143 aa)
     
 
  0.914
PP1S490_20V6.3
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (143 aa)
     
 
  0.914
PP1S311_60V6.1
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (163 aa)
     
 
  0.914
PP1S338_55V6.2
annotation not available (326 aa)
     
 
  0.899
PP1S245_25V6.1
annotation not available (327 aa)
     
 
  0.899
PP1S74_65V6.1
Predicted protein; Belongs to the ubiquitin-activating E1 family (1058 aa)
   
 
  0.888
PP1S5_305V6.1
Predicted protein; Belongs to the ubiquitin-activating E1 family (1058 aa)
   
 
  0.888
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (10%) [HD]