STRINGSTRING
PP1S69_6V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S69_6V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S69_6V6.1Predicted protein (422 aa)    
Predicted Functional Partners:
PP1S116_98V6.1
Predicted protein (348 aa)
   
          0.480
PP1S36_177V6.1
Predicted protein (302 aa)
   
          0.462
PP1S397_37V6.1
Predicted protein (303 aa)
   
          0.456
PP1S30_162V6.1
Predicted protein (433 aa)
   
          0.443
PP1S2_590V6.1
Predicted protein (302 aa)
   
          0.438
PP1S35_121V6.1
Annotation not available (266 aa)
   
          0.434
cpk19
Cpk19 calcium-dependent protein kinase (549 aa)
   
          0.433
PP1S58_96V6.1
Predicted protein (433 aa)
   
          0.431
PP1S92_7V6.1
Predicted protein (398 aa)
   
          0.426
PP1S217_11V6.2
Predicted protein (347 aa)
   
          0.419
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (20%) [HD]