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STRINGSTRING
Pphak1 protein (Physcomitrella patens) - STRING interaction network
"Pphak1" - Potassium transporter in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pphak1Potassium transporter; Potassium transporter (822 aa)    
Predicted Functional Partners:
hkt1
Na+ transporter (706 aa)
         
  0.936
Ppena1
Na+ P-type ATPase ; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family (967 aa)
           
  0.899
PP1S7_345V6.1
annotation not available (450 aa)
           
  0.652
PP1S28_151V6.1
Uncharacterized protein (422 aa)
           
  0.652
PP1S334_27V6.1
Predicted protein (380 aa)
     
   
  0.594
PP1S342_21V6.1
Predicted protein (416 aa)
           
  0.552
PP1S153_5V6.1
Predicted protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (668 aa)
           
  0.537
PP1S153_49V6.1
Predicted protein (504 aa)
           
  0.537
PP1S153_48V6.1
Predicted protein (468 aa)
           
  0.537
PP1S153_32V6.1
annotation not available (640 aa)
           
  0.537
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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