• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S6_175V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S6_175V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S6_175V6.1Predicted protein (341 aa)    
Predicted Functional Partners:
PP1S9_477V6.1
annotation not available (1376 aa)
           
  0.673
PP1S251_37V6.1
Predicted protein (636 aa)
           
  0.607
PP1S79_107V6.1
Predicted protein (352 aa)
     
   
  0.589
PP1S44_236V6.1
annotation not available (347 aa)
     
   
  0.589
PP1S16_36V6.1
annotation not available (348 aa)
     
   
  0.589
PP1S28_319V6.1
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (264 aa)
     
   
  0.578
PP1S28_315V6.1
Predicted protein; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (264 aa)
     
   
  0.578
PP1S60_222V6.1
annotation not available (145 aa)
           
  0.557
PP1S60_221V6.1
Predicted protein (2506 aa)
           
  0.557
PP1S107_71V6.1
annotation not available (2675 aa)
           
  0.557
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (8%) [HD]