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STRINGSTRING
PP1S6_227V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S6_227V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S6_227V6.1annotation not available (810 aa)    
Predicted Functional Partners:
PP1S34_188V6.1
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (736 aa)
     
 
  0.747
PP1S91_231V6.1
Predicted protein (68 aa)
     
 
  0.737
PP1S52_58V6.1
annotation not available (1250 aa)
     
 
  0.627
PP1S217_77V6.1
annotation not available (279 aa)
     
 
  0.627
PP1S90_54V6.1
annotation not available (92 aa)
           
  0.623
PP1S276_76V6.1
Predicted protein (250 aa)
           
  0.613
PP1S44_159V6.1
annotation not available (963 aa)
     
 
  0.612
PP1S323_85V6.1
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (911 aa)
     
 
  0.612
PP1S114_58V6.1
annotation not available (290 aa)
     
 
  0.612
PP1S138_179V6.1
annotation not available (1383 aa)
     
 
  0.601
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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