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STRINGSTRING
PP1S6_30V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S6_30V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S6_30V6.1annotation not available (526 aa)    
Predicted Functional Partners:
PP1S462_12V6.1
Predicted protein (86 aa)
           
  0.591
PP1S341_24V6.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (166 aa)
           
  0.528
PP1S47_183V6.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (487 aa)
           
  0.527
PP1S76_78V6.1
Predicted protein (574 aa)
       
 
  0.524
PP1S115_80V6.1
Predicted protein (377 aa)
       
 
  0.524
PP1S78_128V6.1
Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls (394 aa)
           
  0.521
PP1S248_13V6.1
Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls (536 aa)
           
  0.521
PP1S19_221V6.1
Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls (501 aa)
           
  0.521
PP1S31_124V6.1
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis (612 aa)
           
  0.510
PP1S136_198V6.1
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis (617 aa)
           
  0.510
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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