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STRINGSTRING
PP1S6_369V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S6_369V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S6_369V6.1Predicted protein (399 aa)    
Predicted Functional Partners:
PP1S152_53V6.1
Predicted protein (379 aa)
   
 
  0.729
PP1S407_2V6.1
Predicted protein (416 aa)
   
   
  0.694
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
   
   
  0.677
ALDH12A
Mitochondrial P5CDH (571 aa)
   
 
  0.631
PP1S40_304V6.1
Predicted protein (393 aa)
   
   
  0.629
PP1S246_3V6.1
Predicted protein (254 aa)
   
   
  0.625
PP1S141_128V6.1
Predicted protein (320 aa)
   
   
  0.625
ALDH6A
MM-ALDH (574 aa)
     
 
  0.609
PP1S22_40V6.1
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family (757 aa)
         
  0.601
PP1S129_87V6.1
Predicted protein (272 aa)
   
 
  0.594
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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